Items where Author is "Backofen, Rolf"

The locality dilemma of Sankoff-like RNA alignments

Backofen, Rolf and Will, Sebastian and Hofacker, Ivo L. and Hutter, Frank and Miladi, Milad and Müller, Teresa Bioinformatics, 36. i242-i250 ISSN 1367-4803 (2020)

IntaRNAhelix-composing RNA–RNA interactions from stable inter-molecular helices boosts bacterial sRNA target prediction

Gelhausen, Rick and Will, Sebastian and Hofacker, Ivo L. and Backofen, Rolf and Raden, Martin ISSN 1757-6334 (2019)

CMV: visualization for RNA and protein family models and their comparisons

Eggenhofer, Florian and Hofacker, Ivo L. and Backofen, Rolf and Höner zu Siederdissen, Christian Bioinformatics, 34 (15). pp. 2676-2678 ISSN 1367-4803 Oxford University Press (2018)

Comparative RNA Genomics

Backofen, Rolf and Gorodkin, Jan and Hofacker, Ivo L. and Stadler, Peter F. In: Comparative Genomics. Methods in Molecular Biology, 1704 Humana Press, pp. 363-400 ISBN 978-1-4939-7461-0 (2018)

Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells

Hölzer, Martin and Krähling , Verena and Amman, Fabian and Barth, Emanuel and Bernhart, Stephan H. and Carmelo, Victor and Collatz, Maximilian and Doose, Gero and Eggenhofer, Florian and Ewald, Jan and Fallmann, Jörg and Feldhahn, Lasse and Fricke, Markus and Gebauer, Juliane and Gruber, Andreas R and Hufsky, Franziska and Indrischek, Henrike and Kanton, Sabina and Linde, Jörg and Mostajo, Nelly and Ochsenreiter, Roman and Riege, Konstantin and Rivarola-Duarte, Lorena and Sahyoun, Abdullah and Saunders, Sita and Seemann, Stefan E and Tanzer, Andrea and Vorgel, bertram and Wehner, Stefanie and Wolfinger, Michael T. and Backofen, Rolf and Gorodkin, Jan and Grosse, Ivo and Hoffmann, Steve and Hofacker, Ivo L. and Kaleta, Christoph and Stadler, Peter F. and Becker, Stephan and Marz, Manja ISSN 2045-2322 (2016)

Bioinformatics of prokaryotic RNAs

Backofen, Rolf and Amman, Fabian and Costa, Fabrizio and Findeiß, Sven and Richter, Andreas S. and Stadler, Peter F. RNA Biol, 11 (5). pp. 470-483 ISSN 1547-6286 (2014)

LocARNA-P: Accurate boundary prediction and improved detection of structural RNAs

Will, Sebastian and Joshi, Tejal and Hofacker, Ivo L. and Stadler, Peter F. and Backofen, Rolf RNA, 18 (5). pp. 900-914 ISSN 1355-8382 (2012)

PETcofold: predicting conserved interactions and structures of two multiple alignments of RNA sequences.

Seemann, Stefan E and Richter, Andreas S and Gesell, Tanja and Backofen, Rolf and Gorodkin, Jan Bioinformatics (Oxford, England), 27 (2). pp. 211-9 ISSN 1367-4811 (2011)